Hello, The general idea is to load data that is mapped to one of the genomes in the Browser in a format accepted by the Custom track submission page.
The track dbSNP snp131 has rs53576 at chr3, base 8804121, when using hg19. Maybe create a simple BED4 file that contains a line for each variant for this position and put the alternate allele in the name column (#4). BED format: http://genome.ucsc.edu/FAQ/FAQformat.html#format1 To make sure that the tutorial you examined is the full version that covers all aspects of creating and loading Custom tracks, here is the link: http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#CustomTracks Please feel free to write back to the list if you need more help. Jennifer --------------------------------- Jennifer Jackson UCSC Genome Informatics Group http://genome.ucsc.edu/ On 6/9/10 11:50 AM, Jonathan Kim wrote: > Hello, > > I have a set of data that I want to upload to the genome website; > however, I have no idea how I would upload my data that I have with me. I've > read through your tutorials but it does not specifically direct my question. > I have OXTR - rs53576 and OXTR - rs53576 which has allele's data that > belongs to each subject that I've tested. Please get back to me as soon as > possible. Thank you.* > * > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
