Hi, I searched through genome and genome-mirror lists about how to add annotation info (such as CDS) to genome database on local mirror. Where can I find actual examples of trackDb.ra to load annotation info to local mirror?
Thanks, Tiandao On Tue, Jul 6, 2010 at 4:38 PM, Jennifer Jackson <[email protected]> wrote: > Hi Tiandao, > > For genomes with annotation, the path would be: > > 1) load the reference genome sequence as you have done previously > 2) layer in annotation as tracks mapped to the genome in #1 > > This README in the kent source tree has the details for #2 > kent/src/product/README.trackDb > > I hope this pointer is useful, but please let us know if you need more > help. > > For next time, it would nice for us if you sent your question through one > our mailing lists. This question would be a good fit for the > [email protected] list. Doing this would help us to get you a > speedy answer and also help other users that are reviewing the Q & A on the > public posting. If you need private (not posted) communications, the list > [email protected] would be an alternative as it is internal to the > UCSC Browser team only. > > Best regards, > Jen > > UCSC Genome Browser Support > http://genome.ucsc.edu/contacts.html > [email protected] [email protected] > > > On 7/6/10 1:00 PM, Tiandao Li wrote: > >> Hi Jen, >> >> We have several annotated genomes of viruses download from NCBI and >> other DB serves. Now I want to import them with annotation into our >> local genome browser. Would you please point me to the details of how to >> do it? I import some sequences without annotation to our browser before. >> >> Thanks, >> >> Tiandao >> > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
