Hi Angie, On Monday, August 16, 2010 07:50:29 pm Angie Hinrichs wrote: > Hello Ivan, > > Thank you very much for the detailed bug report! There was an off-by-one > coordinate bug that applied to this particular situation (rightmost base > of exon is leftmost base of - strand codon with SNP on the exon to the > right).
That sounds like what I suspested was going on... good to know it was not a bug in my application, neither in your MySQL data. > It has been fixed in the source code and will go out with the > next code release. (In the meantime, it is fixed on our test server > genome-test.cse.ucsc.edu, with the caveat that the code and data there may > be unstable.) Thank you for taking your time, this certainly was not a major issue and I appreciate your prompt response very much! Best, Ivan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
