To whom this may concern, I was trying to look at the LD pattern in the gene huntingtin (chr4:3,113,412-3,282,656). I specified r^2 for LD value in the track setting ( http://genome.ucsc.edu/cgi-bin/hgTrackUi?hgsid=114494456&c=chr4&g=hapmapLd). However, when I refreshed the viewer, the label was LD YRI LOD. The triangle plots did not appear to change whether I use r^2, D', or LOD, and were also resistent to changes when I specify coloring with something other than red. Is the triangle plot not showing the proper user specification?
thanks, Charleston _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
