Hello, I would like to use the pslMap program. After reading the threads below, firstly, I need to convert my human's SNPs from BED format to PSL format using the genePredToPsl program
http://www.soe.ucsc.edu/pipermail/genome/2006-May/010816.html http://www.soe.ucsc.edu/pipermail/genome/2007-November/015074.html genePredToPsl -bedFormat bedformatfile pslformatoutputfile e.g. bedformatfile has the following entries: chr6 32470491 32470780 BTNL2_NM_019602_exon_1 0 + chr6 32471793 32472141 BTNL2_NM_019602_exon_2 0 + I am not sure how to use the command line above correctly. Thanks for your help. Anh-Dao _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
