Hi Rosy, The accession numbers in your list appear to be EST numbers from GenBank, and would be in our 'all_est' table. Please see this previously-answered question about how to go about associating an EST with a gene name:
http://www.soe.ucsc.edu/pipermail/genome/2007-March/012983.html UniGene IDs are in the table 'uniGene_3' in the 'qName' field. We only have Entrez IDs (formerly locusLink) for members of the RefSeq Genes track (table 'refGene'). You can get them from the 'refLink' table, in the 'locusLinkId' field. -- Brooke Rhead UCSC Genome Bioinformatics Group On 11/24/08 12:12, Jingqin Luo wrote: > Hi, > I have a list of genbank accession number from the Hgu 25 K cutom cDNA > array (Laura Van't Veer 2001 paper "Gene expression profiling predicts > clinical outcome of breast cancer")and wants to find each matching gene > symbol as attached, unigene ID, entrez ID etc for each of the accession > number. Would you please tell me how I can do that? I tried using the UCSC > genome browser but failed. Appreciate your help very much! > > > Thanks! > > Rosy > > > > ------------------------------------------------------------------------ > > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
