Hi Genome Browser team and all, I'm trying to get the Encode histone modification data (Sanger Chips tracks), but something is going wrong. The score element is coming empty in the XML files, like this:
<FEATURE id="encodeSangerChipH3K36me3.chr7.117280115" label="encodeSangerChipH3K36me3"> <TYPE id="encodeSangerChipH3K36me3" category="other" reference="no">encodeSangerChipH3K36me3</TYPE> <METHOD></METHOD> <START>117280116</START> <END>117280352</END> <SCORE>-</SCORE> <ORIENTATION>0</ORIENTATION> <PHASE>-</PHASE> <GROUP id="encodeSangerChipH3K36me3.chr7.117280115"> <LINK href=" http://genome.ucsc.edu/cgi-bin/hgTracks?position=chr7:117280115-117280352&db=hg18";>Link to UCSC Browser</LINK> </GROUP> </FEATURE> DAS URL: http://hgwdev-gencode.cse.ucsc.edu/cgi-bin/das/hg18/features?segment=7:115404471,117281897;type=encodeSangerChipH3K36me3 This is happening for all "encodeSangerChipsXXX" queries. Exception to "encodeSangerChipH3K4me(1,2,3)" for which I could get score data. Anyway to fix this? Is there an alternative DAS server providing Sanger data? I appreciate any suggestion Thank you, Diogo _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
