Hello Mikhail: Using the Table Browser, set the following options:
Group: Mapping and Sequencing Tracks track: BAC End Pairs table: bacEndPairs click on intersection "create". On the next page, select your custom track, and which ever intersection is appropriate for you. Then click submit. Output format: custom track or BED, whatever works for you. Please note there are more advanced intersection options on the Galaxy website: http://main.g2.bx.psu.edu/ Good luck. Please don't hesitate to contact us if you require further assistance. Kayla Smith UCSC Genome Bioinformatics Group Michael Nefedov, PhD wrote: > Dear genome, > > > > Could you please give detailed instructions how to find BACs within my track > using tables: > > > chrX > > 131027247 > > 132642136 > > plate163G5G3A011600kb > > > > I am doing smthg wrong, intersection doesn't work for me. > > > > Thank you in advance, > > > > > > > > Dr. Mikhail Nefedov, > > Children's Hospital Oakland Research Institute (CHORI), > > Phone: 510-428-3885 ext: 5799 > Fax: 510-450-7951 > > > > The email message (and any attachments) is for the sole use of the intended > recipient(s) and may contain confidential information. Any unauthorized > review, use, disclosure or distribution is prohibited. If you are not the > intended recipient, please contact the sender by reply email and destroy all > copies of the original message (and any attachments). Thank You. > > > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > From - Wed _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
