Hello Sahar and thank you for your kind comments,

Some additional untested/experimental comparative alignments are on our 
test server:
http://genome-test.cse.ucsc.edu

We also just published a new 44-Way "Conservation" track in the Human 
Mar. 2006 assembly. The Conservation track description is also a great 
place to find information about how we generated our published data.

Generating your own data and uploading as custom tracks may be a good 
choice for you. Please see our Help, FAQ, and Downloads sections for 
specific help concerning data formats, tools, and sequence.

I hope that this helps to get you started. Please let us know if you 
have specific questions should you choose to generate your own 
conservation custom tracks.

Jennifer Jackson
UCSC Genome Bioinformatics Group
> Good morning,
> I've been using your 17-Way multiZ for a time now and I'm very pleased 
> with it.
> I would like to know if there is anyway I can get a multi alignment or 
> a pairwise one for creatures that are more primitive, chordates or 
> even lesser than that, since all your multi alignments are for 
> vertebrates only..
> That you for your answer,
> Sahar Gelfman
>
> Department of Molecular Genetics & Biochemistry
> Sackler School of Medicine
> Tel Aviv University
> Tel: 972-3-6409154
>
> *sahar gelfman* sahargl at netvision.net.il 
> <mailto:genome%40soe.ucsc.edu?Subject=Re:%20%5BGenome%5D%20MultiZ%20Alignment&In-Reply-To=%3Cf71ff5131f0f.4986e5f9%40netvision.net.il%3E>
> /Mon Feb 2 02:24:25 PST 2009/

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