Hi,
I have a question about:
Vertebrate Multiz Alignment & PhastCons Conservation (28 Species)
When I download datapoints for this track for the next coordinate I get:
track type=wiggle_0 name="28-Way Cons" description="Vertebrate Multiz Alignment
& PhastCons Conservation (28 Species)"
# output date: 2009-02-09 16:35:20 UTC
# chrom specified: chr5
# position specified: 43326979-43326988
# This data has been compressed with a minor loss in resolution.
# (Worst case: 0.0078125) The original source data
# (before querying and compression) is available at
# http://hgdownload.cse.ucsc.edu/downloads.html
variableStep chrom=chr5 span=1
43326979 1
43326980 1
43326981 1
43326982 1
43326983 0.992126
43326984 0.992126
43326985 0.858268
43326986 0.173228
43326987 0.165354
43326988 0.480315
When I watch exactly the same on genome browser it shows poor conservation
(blue graph) despite nucleotide conservation is almost perfect. Genome version
is hg18.
So I was wondering why the blue graph is not consistent with nucleotides data
and datapoints from the table.
Thanks,
Gennady
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