Hello Giorgio, Concerning your questions about a protein fasta formatted sequence, if you are trying to locate a region of genomic (and the related conservation data we have already generated at that location), a suggestion is to BLAT that sequence against the genome to obtain coordinates. Then view/download/extract desired data. http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#BLATAlign
Please see my other response about how to find information about PHASTCons data. Jennifer Jackson UCSC Genome Bioinformatics Group Giorgio Giurato wrote: > Hi, > i'm Giorgio Giurato, a master student in Bioinformatics in Stockholm > University. > I would riceive more information about PHASTCons, and that's, where can i > find this tool?I searched in Genome Browser but i wasn't able to find it. > Can you help me about it? Another question:Can i give it a protein fasta > file to obtain the score? > Thanks very much for your answer > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
