Hello Anneke, Can you provide some more information? Are you using BLAT, located here?:
http://genome.ucsc.edu/cgi-bin/hgBlat If so, when you BLAT a sequence, set the output type to "hyperlink". Then, after hitting submit, there will be "browser" links to view a graphical representation of your sequence in the Genome Browser, and "details" links to see your sequence and the reference sequence side-by-side. Also see this free online tutorial: http://www.openhelix.com/downloads/ucsc/ucsc_home.shtml (Look under "UCSC Introductory Genome Browser Training".) -- Brooke Rhead UCSC Genome Bioinformatics Group On 02/12/09 07:44, Lehmann, Anneke wrote: > Dear UCSC Genome Browser Team, > > I habe got a question concerning the display of common integration sites > found in different genes. > I cannot find the button I have to use to display my sequence I did blast, > the reference genes AND the RTCG. > Could you help me please?! > Thanks a lot, Anneke Lehmann > Anneke Nina Lehmann > Abteilung Molekulare Pathologie > Heinrich-Pette-Institut > Martinistraße 52 > 20251 Hamburg > Tel: 49-40-48051-274 > Fax: 49-40-48051-187 > email: > [email protected]<mailto:[email protected]> > homepage: www.hpi-hamburg.de > > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
