Hi, Doug,
If you are BLATting only a single sequence, the simplest
way
to the genomic context of your sequence is to click
through
to the Genome Browser and follow the DNA link at the top
of
the page and get the actual sequence. On that page you
can
pad the sequence with any amount of flanking sequence you
like.
best wishes,
--b0b kuhn
ucsc genome bioinformatics group
On Fri, 20 Feb 2009 22:49:18 -0800
Doug Wolfgram <[email protected]> wrote:
> When I use the online version of blat and see the
>results, I see my
> sequence in the middle of a larger sequence. Is it
>possible to get
> Blat to output this larger sequence?
>
>
> -------------
> Doug Wolfgram
> [email protected]
>
>
>
> _______________________________________________
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> http://www.soe.ucsc.edu/mailman/listinfo/genome
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