Hello, We recommend using the Table browser to start with (FAQ and help are linked from page header): http://genome.ucsc.edu/cgi-bin/hgTables
For your query, set the clade = Mammal, genome = Mouse, assembly = Feb. 2006, group = Variation and Repeats, and track = SNPs (126). Set region = genome. Set identifiers = paste or upload a single column of data, one rs name per line. Set output type and name file (if downloading). If you have data from dbSNP 128 from the mouse July 2007 assembly that you are unable to find in the track above, you can try to map the data using our liftOver tool. Links to utilities/instructions: http://genome.ucsc.edu/cgi-bin/hgLiftOver web tool http://genome.ucsc.edu/FAQ/FAQdownloads#download28 last paragraph, unix tool We hope this helps, Jennifer Jackson UCSC Genome Bioinformatics Group Gabriel Leiva wrote: > Hello, > > > > I have a list of more then 200 SNPs for the mouse genome in build 37 (each > SNP have it "rs" name). I need to have their position in build 36. Is there a > way to query for the SNP position for more then one SNP at the time, so I can > do all of them at once (instead of one at the time)? > > > > Thank you very much, > > > > Gabriel Leiva > > > > > > === > Gabriel André Leiva-Torres, M.Sc. > Research Assistant (Dr. Silvia Vidal) > McGill Life Sciences Complex > Bellini Pavilion, Room 356 (3620) > 3649 Promenade Sir William Osler > Montreal, QC, H3G 0B1 > > Phone: 514-398-2360 > Fax: 514-398-2603 > [email protected] > > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
