Hello, There are some files in the Downloads area you may find helpful. For the latest human, see this location: http://hgdownload.cse.ucsc.edu/goldenPath/hg18/bigZips/ The files upstream* contain annotated UTR sequence data that could be used to generate statistics.
Not all species will have this data. For those, you will need to download the gene prediction data and parse. FAQ/Help: http://genome.ucsc.edu/FAQ/ http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html You may find other useful statistics per-genome on the species' gateway and credits pages. Once you get started, if you need any specific help, please let us know and we can provide more detailed instructions, Jennifer Jackson UCSC Genome Bioinformatics Group Erik Dassi wrote: > Hi, is there a quick way to get the number of genes having annotated > UTRs for a particular specie or should I extract UTRs informations and > genes information and parse the results ? > > thanks, > erik > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
