Hi Atif,
Creating a local install will allow you to add in "permanent" tracks to 
your own site. Another option is to use the Sessions feature. Be sure to 
keep backup copies of any regular or Session custom tracks.

Browser installation help: 
http://genomewiki.ucsc.edu/index.php/Browser_installation
Info about Sessions: 
http://genome.ucsc.edu/goldenPath/help/hgSessionHelp.html

Jennifer Jackson
UCSC Genome Bioinformatics Group

Atif Shahab wrote:
> thanks!  That worked for custom tracks.
>
> Is there a way to generate a bedGraph permanent track if needed?
>
> - atif
>
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