Hello Hussam, Here is a session with the FISH track and the assembly track turned on. You'll see two repeat tracks turned on as well. Is the the visualization you had in mind? You could also use our Table Browser to filter based on an intersection of clones and repeats: http://genome.ucsc.edu/cgi-bin/hgTracks?hgS_doOtherUser=submit&hgS_otherUserName=Kayla&hgS_otherUserSessionName=kayla_hg17_8p23.3_for_Hussam
Here is the Table Browser user's guide: http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html I hope this helps to get you started. Please don't hesitate to contact us again if you require further assistance. Kayla Smith UCSC Genome Bioinformatics Group ----- "Hussam Al-Kateb" <[email protected]> wrote: > Hi, > How can I display clones on the human -May 2004 genome that do NOT have > repetetive sequences? My area of interest is 8p23.3. In other words is there > any way that I can display clones in that highly repetetive area that can be > used for FISH studies and do not produce hyperidization background or > overlap?? > Many thanks. > Hussam Al-Kateb > > Hussam Al-Kateb, PhD (Clinical Cytogenetics and Molecular Genetics Fellow) > Case Western Reserve University > Cleveland, OH > Tel:216-983-1138 > E-mail: [email protected] > _______________________________________________ > Genome maillist - [email protected] > http://www.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
