Hello, I am visualizing copy number variation in a set of data on genome browser. Some of these are intergenic and I would like to calculate the distance between the ends of the CNVs and the closest genes. This would mean for the 3' end of the CNV, i would know how many bp there are between the 3' end of the cnv and the 5' of the closest upstream gene. Likewise for the 5' end of the CNV and the 3' of the next gene. How can I export this data from the UCSC genomebrowser site? I would want to collet the gene name as well.
Let me know, I can't seem to find it on the FAQ page, even though someone probably has asked it before. Thanks Ingrid Ingrid Lindquist Class of 2010 [email protected] 505.310.8932 ----------------- Bucan Laboratory University of Pennsylvania Department of Genetics Philadelphia, PA _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
