Hi: I know from the website (http://genome.ucsc.edu/FAQ/FAQdownloads#download10) that random fasta files associated with chromosomes are data data related to sequence that is known to be in a particular chromosome, but could not be reliably ordered within the current sequence and now also for sequences that is not in a finished state, but whose location in the chromosome is known, in addition to the unordered sequence.
However, I am interested in determining contig info for sequence matches to the random files associated with chromosomes. Specifically, is there a table matching e.g. chr1_random to different NCBI identifiers (e.g. NT_004434.18)? Would chr1_random be ONE contig or conglomerate of all unmatching contigs associated with chr1? thanks for you assistance. Jimmy _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
