Please note: http://genome.ucsc.edu/FAQ/FAQblat
--Hiram Daofeng Li wrote: > Hi, > > i think this problem might be discussed for many times and i do find som > search results for that > one mail i searched is of Jim which contains: > //// > Hmm. You could just use the -out=blast option if you > really want a drop-in replacement. Otherwise try > > percentId = 100.0 * (match + repMatch) / > (misMatch + match + repMatch + qNumInsert + tNumInsert) > ///// > > i had try that formula,find the result output by command line blat still > different with webblat... > can anyone give another calc method? or something of mine wrong? > > Best Wishes. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
