Hi, I am currently trying to convert my custom tracks into bigBed, to make it faster. But I came across a bug. I made a screenshot of my browser view below, it contains the bigBed version of tracks (called "2Q1M") and I also added a few line of the original BED custom tracks manually (User Supplied Track), so that you can see how it's supposed to look. The thick end on the 3' side for all my minus strand tracks disappears in the bigBed format.
When clicking on one of these (CH252-438C22-T7 here), the coordinates are right, only the thicker black square doesn't appear : Here are the BED lines : chr3 46428184 46538284 CH252-286E21-Sp6 1000 - 46428184 46538284 0 2 1,7000 0,103100 chr3 46445463 46555563 CH252-322D14-T7 1000 - 46445463 46555563 0 2 1,7000 0,103100 chr3 46458565 46568665 CH252-130I24-Sp6 1000 - 46458565 46568665 0 2 1,7000 0,103100 chr3 46458567 46568667 CH252-356E7-T7 1000 - 46458567 46568667 0 2 1,7000 0,103100 chr3 46494117 46604217 CH252-410B16-T7 1000 - 46494117 46604217 0 2 1,7000 0,103100 chr3 46497854 46607954 CH252-526M24-T7 1000 - 46497854 46607954 0 2 1,7000 0,103100 chr3 46510064 46620164 CH252-254O3-Sp6 1000 - 46510064 46620164 0 2 1,7000 0,103100 chr3 46513224 46623324 CH252-457N6-Sp6 1000 - 46513224 46623324 0 2 1,7000 0,103100 chr3 46537860 46647960 CH252-438C22-T7 1000 - 46537860 46647960 0 2 1,7000 0,103100 It's also considerably slow, but maybe the server is just having a hard time today. Thanks for your help, Jessica -- Jessica Wasserscheid Bioinformatician, Vervet Monkey Genomics Project http://www.genomequebec.mcgill.ca/compgen/submit_db/vervet_project McGill University & Genome Quebec Innovation Center 740 Dr. Penfield Avenue Room 7211 Montreal, Quebec Canada, H3A 1A4 Email : [email protected] Phone : (001) 514-398-3311 #00476 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
