Hello, This exact data does not exist, but here are a few tracks you can use to start such analysis.
Tracks from the human genome: UCSC Genes Pos Sel Genes ACEScan TransMap Tracks present in some of the other species (not all): Human Proteins For all: The genomic comparisions contained in the Conservation, Net and Chain tracks. These are based on genomic comparisions, so linking back to genes, then localizing to the 3' end (if that is a requirement - seems to be from your description) would be required. Exploring other tracks may also be useful. Some programing/data manipulation would be required that is not contained as a UCSC Browser-based tool. Each track has a description that contains the methods, sources, and references. The sequences can be downloaded using the Table browser (restricting to 3'UTR is an option). The actual sequence (once the gene/transcript names are identified) would need to be extacted from that sequence's native browser. In some cases the mRNA/protein is available, in other cases only the genomic. Good luck and let us know if you need more help, Jennifer Jackson ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Yuan Jian" <[email protected]> wrote: > From: "Yuan Jian" <[email protected]> > To: [email protected] > Sent: Tuesday, August 18, 2009 9:31:49 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] homologue > > Hi USCS support, > How can I get all homologue 3'UTR sequences in human, mouse, rat, > chicken, dog's? > thanks! > Yu > > > > > __________________________________________________________________________________ > Find local businesses and services in your area with Yahoo!7 Local. > Get started: http://local.yahoo.com.au > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
