To UCSC Genome Browser project, WHAT I DID SO FAR: I downloaded the jksrc.zip file from your website onto our UNIX server. I defined the environment variable MACHTYPE = i386 I created a subdirectory under my home directory called bin/i386 I created a subdirectory called jksrc and unzipped the jksrc.zip and it created the subdirectory jksrc/kent. I went to the jksrc/kent/src directory and typed "make libs" I went to the jksrc/kent/src/hg directory and typed "make compile"
WHERE I AM STUCK NOW: Now I need to define the two environment variables MYSQLINC and MYSQLLIBS. MYSQLINC is supposed to point to the include files. From your examples, you define it to point to th mysql subdirectory. There are two mysql subdirectories on my system "usr/lib/mysql" and "usr/share/mysql". Which one should I point it to? MYSQLLIBS is supposed to point to the /usr/lib/mysql/libmysqlclient.a library. But in the /usr/lib/mysql directory, there is NO file called libmysqlclient.a. There are files called libmysqlclient.so.60, libmysqlclient.so.16.0.0, libmysqlclient_r.so.16 and libmysqlclient_r.16.0.0. What do I define these two environment variables to? Sincerely, Kenneth Watanabe University of Nevada LV _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
