Hi Abdel, I believe the error with your file is that the expNames variables are separated by spaces rather than the required commas. You do not need to modify trackDb or microarrayGroups.ra if you are loading a custom track. More information about microarray custom tracks can be found here: http://genomewiki.cse.ucsc.edu/index.php/Microarray_track.
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group ----- Original Message ----- From: "Abdel Elkahloun (NIH/NHGRI) [E]" <[email protected]> To: [email protected] Sent: Tuesday, October 5, 2010 8:39:00 AM GMT -08:00 US/Canada Pacific Subject: [Genome] UCSC microarray custom track Hi I need a big favor from you. I want to create a microarray custom track on the UCSC genome browser but the info provided is not clear to me! I have made the bed file (attached is a partial list) that is not recognized by the browser! could you please see what may be wrong with the file? also where should the trackDb Settings and microarrayGroups.ra be loaded? there are 6 experiments for which I would like to compare the hybridization intensity for each Exon. Thank you in advance. Abdel _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
