Hi Guo, if you know how to use blat, you might want to create your own liftOver file, see http://genomewiki.ucsc.edu/index.php/LiftOver_Howto
cheers Max On Wed, Oct 20, 2010 at 6:53 PM, Mary Goldman <[email protected]> wrote: > Hi Yan, > > Thank you for your question. At this time, we are not providing liftover > chains between hg18 and the Asian reference genome because we are still > trying to determine the best option for displaying the differences > between the reference genome provided by NCBI and other human genomes. > We do not know yet when we will have a solution available, but please > feel free to check back with us later. > > Best, > Mary > --------------------- > Mary Goldman > UCSC Bioinformatics Group > > On 10/19/10 9:09 AM, Guo, Yan wrote: >> Hi, can you provide a mapchain between hg18 and this asian reference genome? >> http://yh.genomics.org.cn/download.jsp >> >> Thanks >> >> Yan >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
