Dear Jirong, The table browser would be the best option for what you are trying to do. To get to the table browser, click on "Tables" from the blue navigation bar.
Select the appropriate clade, genome & assembly. And then set the following: group: Variation and Repeats track: SNPs (130) table: snp130 region: genome output format: selected fields from primary table and related tables output file: FileName (to save the file on your computer) Click on "get output" Select the following: chrom chromStart chromEnd name strand Click on "get output" If you have further questions, please don't hesitate to contact the mailing list. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "Jirong Long" <[email protected]> To: [email protected] Sent: Thursday, October 21, 2010 6:51:47 AM GMT -08:00 US/Canada Pacific Subject: [Genome] dbSNP 130 Good morning Sir/Madam, We are hoping to download all dbSNP 130 SNPs with the following information: rs#, chr, position (NCBI Build 36). Do you know how we can download this? Your help is greatly appreciated! Best, Jirong ******************************************* Jirong Long, PhD Assistant Professor Division of Epidemiology, Department of Medicine Vanderbilt Epidemiology Center, IMPH Vanderbilt University School of Medicine Eighth floor, Suite 800 2525 West End Avenue Nashville, TN 37203-1738 Tel: 615-343-6741 Fax: 615-322-0502 E-mail: [email protected]<mailto:[email protected]> www.mc.vanderbilt.edu/epidemiology<http://www.mc.vanderbilt.edu/epidemiology> _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
