Hi Maimoona, The easiest solution would be to use the table browser (http://genome.ucsc.edu/cgi-bin/hgTables). First, select your genome, assembly and gene prediction track of interest. Then, enter the coordinates of your two SNPs as a genomic interval in the position box and click "get output".
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 10/20/10 3:10 PM, Maimoona Zariwala wrote: > For the possible linked region surround by two SNPs (that are annotated > in dbSNP), how can I find all the known genes within that interval? > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
