Good Morning Jacob:
Something has gone haywire. With your USE_ variables defined and in your shell
environment properly. Go to the top of your source tree and run:
$ cd src
$ make clean
$ make libs
$ cd hg
$ make compile
$ make install DESTDIR=... CGI_BIN=...
Please note the instructions on this in the source tree file:
src/product/README.building.source
Check the "Known problems:" listing near the end of this document
for anything you many encounter. If you come up with a new problem
let me know and we can get it documented. Max's instructions are interesting,
but they are specific for his location.
--Hiram
Jacob C Schwartz wrote:
>> From: jacob schwartz <[email protected]>
>> Date: October 27, 2010 10:08:41 AM MDT
>> To: Mary Goldman <[email protected]>, Galt Barber <[email protected]>,
>> Maximilian Haussler <[email protected]>
>> Subject: Re: [Genome] install Mac OS X 10.6.4
>>
>>
>> Hi Mary, I installed Libpng14 and samtools and zlib and tried setting the
>> USE variables. So I've created a new problem.
>>
>> 1) It will either return error about jkweb.a(pngwrite.o) has no symbols if I
>> add the -lssl and -lcrypto to the MYSQLLIBS like you recommended and do make
>> without setting USE variables, the PNGINCL variable or the SAMDIR variable.
>>
>> 2) If I set USE variables to 1 is get an error jkweb.a(gifwrite.o) has no
>> symbols.
>>
>> 3) If I try messing with the PNGINCL variable I get an terrible error about
>> invalid option "-Wno-double-somethingorother" when the make is just a few
>> lines in.
>>
>> I suppose I need another GIF library? Do you know where I look for that?
>>
>> Also, Max, the protocol you've recommended is the one that has worked best
>> for me so far. I'm close, I think I'm just missing some critical component.
>>
>> Thanks so much for your help,
>>
>> Jacob
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