Good Afternoon Ruei: Please note the download directories for all files and data related to the 30-way mouse alignment:
http://hgdownload.cse.ucsc.edu/goldenPath/mm9/multiz30way/ http://hgdownload.cse.ucsc.edu/goldenPath/mm9/phastCons30way/ http://hgdownload.cse.ucsc.edu/goldenPath/mm9/multiz30way/alignments/ Also available via rsync or FTP. ftp://hgdownload.cse.ucsc.edu/goldenPath/mm9/multiz30way/ ftp://hgdownload.cse.ucsc.edu/goldenPath/mm9/multiz30way/alignments/ ftp://hgdownload.cse.ucsc.edu/goldenPath/mm9/phastCons30way/ rsync -avz --progress rsync://hgdownload.cse.ucsc.edu/goldenPath/mm9/multiz30way/ ./multiz30way/ rsync -avz --progress rsync://hgdownload.cse.ucsc.edu/goldenPath/mm9/phastCons30way/ ./phastCons30way/ --Hiram Ruei Shiuan Lin wrote: > Dear UCSC staff, > > I have difficulties in obtaining the multiz30way data from your > database. My plan is to download the formated multiz30way data (an > example shown here: > http://www.genome.ucsc.edu/cgi-bin/hgc?org=mouse&db=mm9&o=136455974&t=136464494&g=multiz30way&i=multiz30way) > > for my 40 interested genes. I have tried the table browser but it > didn't include the 'coding capital base' expressions. I also tried the > screen scrapping, the retrieved contents indicated an early error(?). > Could you help me figuring out a way to do it? Thanks. > > Sincerely, > > Ruei _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
