Hi Thong, These are genome-wide data. In general, unless an ENCODE track is listed under one of the "Pilot ENCODE" headers on the main Genome Browser page (http://genome.ucsc.edu/cgi-bin/hgTracks), it is genome-wide data. Another way to double-check that any particular track you are using is genome-wide is to hit the "schema" link/button on the track details page or in the Table Browser. If the table name starts with "wgEncode" it is genome-wide ("wg" stands for "whole genome").
-- Brooke Rhead UCSC Genome Bioinformatics Group On 11/07/10 17:25, NGUYEN Trung Thong wrote: > Dear friends, > > I am interested in histone modifications ChIP-seq data and have found two > sources (by Broad Institute and by Univ. Washington) available on the UCSC > Genome Browser. If you don't mind, could let me know whether these are > genome-wide data or just some parts of the human genome? I am using > genome-wide histone modifications data of Barski et al. (Cell 2007) and hope > to have more data from different cell lines. > > Thanks a lot, > > Thong > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
