Hi Thomas, I wanted to clarify my previous answer based on this information from one of our developers:
"Alignments are job of blat, and there is no mechanism to download those results from our web pages." You might be interested in using the alignments we already have in either the chain/net tracks or the multiple alignment (Conservation) tracks. Galaxy has additional tools that you might want explore at http://galaxy.psu.edu/. Thanks, Katrina Learned UCSC Genome Bioinformatics Group Katrina Learned wrote, On 11/12/2010 2:41 PM: > Hi Thomas, > > Yes, we have the UCSC DAS server. Please see this FAQ for more information: > http://genome.ucsc.edu/FAQ/FAQdownloads.html#download23 > > Please don't hesitate to contact the mail list again if you have any > further questions. > > Katrina Learned > UCSC Genome Bioinformatics Group > > > Thomas Juettemann wrote, On 11/10/10 06:47: >> Hi all, >> >> I was wondering if you have any webservices? I'd like to do something like >> this: >> >> 1) Align Chr1, 1-1000 of human to the same chromosome and region of >> mouse and rat. >> 2) Download the alignments >> >> Or does such thing only work with the table browser? >> >> Thanks for your help! >> >> Cheers, >> Thomas >> _______________________________________________ >> Genome maillist [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
