Sir/Madam,

 

I've been trying to compare indel positions downloaded from 1000 Genomes
with those in the UCSC browser, however there are some differences
between the two sources, e.g in build 36 for rsid rs35362888

 

UCSC : Chr1     245712954        245712955

1000G: Chr1      245712945

 

Any help/suggestions as to why there could potentially be differences,
or where the 1000Genomes positions originate from, would be greatly
appreciated.

 

Regards

 

Robin Young

 

Cardiovascular Epidemiology Unit

Department of Public Health and Primary Care

University of Cambridge

 

Strangeways Research Laboratory

Worts Causeway

Cambridge

CB1 8RN

United Kingdom

 

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