Hi all,

I'm deal with some sequencing data. I have found a extremely large 
intron (~ 1.5 Mb) generated by exon skipping events. I have tried to 
align this isoform to human genome but failed, no matter what number I 
have set "maxIntron" as.  It seems that this option doesn't work at all??

Someone had a similar post two years ago, but no response...

Best,
Shuli
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