thanks, I am using hg18. I can not find button called "descirbe schema", I have only "describe table schema". yes I can go to the "manage custom tracks" to see. but I have to click one by one. as I said I have very large amount of custom tracks.
my question is how can I get all scripts that I have copied and pasted in "add custom tracks"? thanks Jian --- On Tue, 30/11/10, Hiram Clawson <[email protected]> wrote: From: Hiram Clawson <[email protected]> Subject: Re: [Genome] get custom track scripts To: "Yuan Jian" <[email protected]> Cc: [email protected] Received: Tuesday, 30 November, 2010, 8:03 AM If you use the ctfile_hg19 variable and look at that file, you will see them all at once. Also, you can see them if you go to the "manage custom tracks" and look at them there. ----- Original Message ----- From: "Yuan Jian" <[email protected]> To: "Hiram Clawson" <[email protected]> Cc: [email protected] Sent: Monday, November 29, 2010 11:29:54 PM GMT -08:00 US/Canada Pacific Subject: Re: [Genome] get custom track scripts Hi Hiram, thanks. but I have many tracks. it is quite hard for me do it one by one. is it possible to download all my cutom tracks in one "click"? thanks jian --- On Mon, 29/11/10, Hiram Clawson <[email protected]> wrote: From: Hiram Clawson <[email protected]> Subject: Re: [Genome] get custom track scripts To: "Yuan Jian" <[email protected]> Cc: [email protected] Received: Monday, 29 November, 2010, 6:18 PM Go into the table browser. Select one of your tracks and click on the "describe schema" You will see the URL to your bigData file from there. Or, alter your URL in your WEB browser to be: genome.ucsc.edu/cgi-bin/cartDump and look for a variable ctfile_hg19 ../trash/ct/someFileName.bed Enter that file name in a URL: genome.ucsc.edu/trash/ct/someFileName.bed --Hiram Yuan Jian wrote: > Dear UCSC supporters, > I have added many custom track that are bigbed files. for some tracks, I > forgot which bb files I refer. my question is: > How can I get all custom track's scripts that are uploaded in my local > machine? > the expected file is something like: > track type=bigBed name="XXX" description="XXX" visibility=pack itemRgb="On" > bigDataUrl= http://XXXX > > track type=bigBed name="XXX" description="XXX" visibility=pack itemRgb="On" > bigDataUrl= http://XXXX > track type=bigBed name="XXX" description="XXX" visibility=pack itemRgb="On" > bigDataUrl= http://XXXX > ......... _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
