Good Morning John: If you view the assembly track, you can see the contigs used in the assembly. Looking up the two records you mention here, it appears these sequences have been updated:
FP102063.2 - http://www.ncbi.nlm.nih.gov/nuccore/224697054 FP085461.4 - http://www.ncbi.nlm.nih.gov/nuccore/225735357 You can check with the Porcine Genome Sequencing Project to report assembly errors: http://www.sanger.ac.uk/Projects/S_scrofa/ --Hiram John Edwards wrote: > Hi, > Not sure where to send this. > > Pig genome Nov 2009 assembly: > > Has two copies of gene TMSBX - which would be unique amongst tetrapod genomes. > Also duplicates TLR8 > > A segment containing at least the following region is duplicated with 100% > identity, which seems most likely to be an assembly error: > > X + 8565187 - 8604785 > > appears again at: > > X + 8729259 - 8768858 > > John Edwards _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
