Hi Ron, The score column used to reflect the raw alignment score of the BLAST results but was dropped in favor of other more relevant data such as fracMatch. This is why this column contains only zeros. We will be changing the table schema (http://genome.ucsc.edu/cgi-bin/hgTables?db=hg18&hgta_group=varRep&hgta_track=genomicSuperDups&hgta_table=genomicSuperDups&hgta_doSchema=describe+table+schema) to reflect this.
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 12/21/10 2:51 PM, Shigeta, Ron wrote: > Just reviewing the latest (hg19) post of this track shows the score values > are all zero. > > The last hg18 version of the track has scores ranging from 0 to 99992. > Can you tell us about why this happened? > > Is this something that will be changed or is it to stay zero? > > Thanks! > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
