Hi Nicholas, The UCSC Genes track has an (untranslated) exon in the position you specified. When you retrieve alignments for regions that have *no* overlap with the UCSC Genes track, the exon is considered overlap, and you don't get any alignments for that region. Does that make sense?
If you have further questions, please feel free to contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 01/03/11 13:20, Nicholas Price wrote: > Hi > > Position: chr5:150257537-150257677 is suppose to be the location of a human > pseudogene. When I use tables group:Comparative geomics, Multiz46way > Intersection: no overlap with known genes ....I get no alignments back. Why > is that? > > > Nicholas _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
