Hello Chris, The best way to do this would be to create a bigWig file from your data. You can find more information on this file format here:
http://genomewiki.ucsc.edu/index.php/Selecting_a_graphing_track_data_format http://genome.ucsc.edu/goldenPath/help/bigwig.html The easiest way to do this is to first create a bedGraph file, which lets you specify a value for a range of bases, and then to use the bedGraphToBigWig program, which is available pre-compiled for various operating systems here: http://hgdownload.cse.ucsc.edu/admin/exe/ You can find more information about the bedGraph file format here: ftp://hgdownload.cse.ucsc.edu/apache/htdocs-rr/goldenPath/help/bedgraph.html Best regards, Pauline Fujita UCSC Genome Bioinformatics Group http://genome.ucsc.edu On 1/5/11 2:58 AM, Chris Dias wrote: > Hi, > > I have exome sequencing coverage data for selected RefSeq exons in csv > format of several individuals. I would like to display the mean coverage per > base and the mean coverage per exon graphically using Hg18 in the UCSC > genome browser. Can someone suggest how to do this? > Many thanks, > Happy New Year > Chris > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
