Good Morning Nicholas: You can use the corresponding chain/net tracks for the questionable sequence to see how the alignments may be missing.
--Hiram Nicholas Price wrote: > Hi > > I am using multiz46way to identify pseudogenes in primates that are > orthologous to a set of human pseudogenes..I downloaded the the data and I > noticed that in some cases I am missing pseudogenes that are closer to > human...for example I may have an alignment that includes human, gorilla, > macaque but not chimp...What is the most probable reason for that? bad > sequencing? > > Nicholas _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
