Hi KT, Are you looking for mRNA sequences, including the sequences that were did not align to the reference assembly? If so, you can get that from our downloads page:
http://hgdownload.cse.ucsc.edu/downloads.html Click on the organism you are working with, then "Full data set", then look for the file "mrna.fa.gz". If you also want mRNA from other organisms, look for the file "xenoMrna.fa.gz". The page with the mRNAs for the latest human assembly, for instance, is located here: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/ If you plan to download the xenoMrna file, which is quite large, we recommend using ftp rather than http. If this is not what you are looking for, please write us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 01/24/11 15:50, Kayoko Tao wrote: > How could I get all the transcripts including the not-yet annotated ones through the Table browser? > Sincerely, > > KT > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
