Hi Bogdan, This may be done using the Table Browser. From the main page, click on "Tables" in the blue navigation bar and set the following:
clade: Mammal genome: Human assembly: Feb. 2009 (GRCh37/hg19) (or select assembly of interest) group: Genes and Gene Prediction Tracks track: UCSC Genes table: knownGene region: genome (you may select a smaller region using the position box) identifiers (names/accessions): (you may paste or upload a list of identifiers you are interested in) output format: selected fields from primary related tables Click "get output". From here, under "Select Fields from hg19.knownGene", select "name". Then under "hg19.kgXref fields" select "refSeq". Scroll up and click "get output". More information on how to use the Table Browser can be found here: http://genome.ucsc.edu/cgi-bin/hgTables#Help Please contact us again at [email protected] if you have further questions. Regards, Luvina --- Luvina Guruvadoo UCSC Genome Bioinformatics Group Bogdan Tanasa wrote: > Dear all, > > please could you suggest a quick and simple way to cross-reference UCSC gene > names to RefSeq gene names ? thanks ! > > bogdan > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
