Hello Hiram, On Feb 11, 2011, at 4:18 PM, Hiram Clawson wrote:
> Good Morning Davide: > > It is not a buffer problem from stdin. You would encounter > the same problem reading from a file. I'm guessing you > are getting an out of memory condition while running > wigToBigWig. The program consumes an immense amount of > memory while it works. Many 10s of Gb of memory for > large wiggle files. You will need to have a large memory > machine to convert large wiggle files. > Actually I was having issues of reading stdin, but I found that was not related to wigToBigWig. I'm interested in memory issues, of course, so please keep us updated :-) Thanks d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: [email protected] */ _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
