Hi Stephen,

It sounds like you are trying to download from the Table Browser page, 
which may be why you are experiencing problems. You can download the 
hg19 refFlat table from our Downloads page found here: 
http://hgdownload.cse.ucsc.edu/downloads.html. Click on "Human", then 
click on "Annotation database". On the following page, scroll down where 
you will find both the refFlat.sql and refFlat.txt.gz files. The .sql 
file contains MySQL commands to create the table, and .txt.gz is the 
tab-delimited compressed file.

Please contact us again at [email protected] if you experience anymore 
problems.

Regards,
Luvina

---
Luvina Guruvadoo
UCSC Genome Bioinformatics Group


Stephen Turner wrote:
> I'm trying to download the entire hg19 refFlat table. It stops after about
> ~6000 rows if I download plain text. If I try to download a compressed file,
> the compressed file is corrupt. Can anyone help me?
>
> Thanks,
>
> Stephen
> _______________________________________________
> Genome maillist  -  [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
>   

_______________________________________________
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https://lists.soe.ucsc.edu/mailman/listinfo/genome

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