Hello, I have been trying to install blat on my linux server. I set the $MACHTYPE to x86_64. cd kent/src/lib make, and get this error:
[root@BatLC1 lib]# make gcc -O -g -Wall -Werror -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DCOLOR32 -Wall -Werror -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -o pngwrite.o -c pngwrite.c pngwrite.c:7:87: error: png.h: No such file or directory pngwrite.c:13: error: expected â)â before âpngâ pngwrite.c:19: error: expected â)â before âpngâ pngwrite.c: In function âmgSaveToPngâ: pngwrite.c:34: error: âpng_structpâ undeclared (first use in this function) pngwrite.c:34: error: (Each undeclared identifier is reported only once pngwrite.c:34: error: for each function it appears in.) pngwrite.c:34: error: expected â;â before âpngâ pngwrite.c:37: error: âpngâ undeclared (first use in this function) pngwrite.c:42: error: âpng_infopâ undeclared (first use in this function) pngwrite.c:42: error: expected â;â before âinfoâ pngwrite.c:43: error: âinfoâ undeclared (first use in this function) cc1: warnings being treated as errors pngwrite.c:46: error: implicit declaration of function âpng_destroy_write_structâ pngwrite.c:52: error: implicit declaration of function âpng_jmpbufâ pngwrite.c:62: error: implicit declaration of function âpng_init_ioâ pngwrite.c:64: error: implicit declaration of function âpng_set_IHDRâ pngwrite.c:65: error: âPNG_COLOR_TYPE_RGBAâ undeclared (first use in this function) pngwrite.c:65: error: âPNG_INTERLACE_NONEâ undeclared (first use in this function) pngwrite.c:66: error: âPNG_COMPRESSION_TYPE_DEFAULTâ undeclared (first use in this function) pngwrite.c:66: error: âPNG_FILTER_TYPE_DEFAULTâ undeclared (first use in this function) pngwrite.c:91: error: âpng_byteâ undeclared (first use in this function) pngwrite.c:91: error: ârow_pointersâ undeclared (first use in this function) pngwrite.c:91: error: expected expression before â)â token pngwrite.c:95: error: implicit declaration of function âpng_set_rowsâ pngwrite.c:96: error: implicit declaration of function âpng_write_pngâ pngwrite.c:96: error: âPNG_TRANSFORM_IDENTITYâ undeclared (first use in this function) make: *** [pngwrite.o] Error 1 Any help is appreciated. -- Gregory McInnes Sequence Analyst, Evolutionary Medicine & Informatics Undergraduate Student, Arizona State University _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
