Good morning, I found a discrepancy among RefSeq annotation and UCSC genome browser annotation. For example, MYBPC3 gene (NM_000256) has 35 exons (We are sure of this information). Two of these exons are very small and have only 3 nucleotides (exon 10: chr11:47,368,578-47,368,580 and exon 14: chr11:47,364,811-47,364,813). In NCBI and Ensembl databases, I can find the correct exon counts with the correct coordinates, while in Genome Browser, the MYBPC3 exon counts is 33, and these small exons are reported as introns (in Tables fields too).
How can I explain this mismatch? Thanx a lot, Maria Elena _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
