Hi Carlos, For directions on loading your own track into your mirror see: http://genomewiki.ucsc.edu/index.php/Adding_New_Tracks_to_a_browser_installation Additionally, the "See Also" section of that page, which provides more helpful resources: "For a generic discussion of how to load any type of track into your local browser mirror, refer to the document in the source tree src/product/README.trackDb and the discussion of how the trackDb entries function in src/hg/makeDb/trackDb/README".
The Personal Genome SNP would probably work best for your purposes, however the colors displayed cannot be based on a SNP's function. In order to color the track in this way, you would have to use a BED detail format, which wouldn't automatically calculate all that the Personal Genome SNP format does. For more information about these track types, see this previously answered Mailing List question: https://lists.soe.ucsc.edu/pipermail/genome/2011-February/025155.html Please contact the mail list ([email protected]) again if you have any further questions. Katrina Learned UCSC Genome Bioinformatics Group Carlos Javier Borroto wrote, On 04/22/11 13:50: > Hi, > > Is it possible to create a "Personal Genome SNP" local track(not just > a custom) in a local mirror? What track type can I use? > > Also, I see the "Personal Genome SNP" custom track detail page gives > information about the function of the SNP, but can this information be > shown using a color code like in snp132 instead of the allele > frequency coloring? > > Thanks, > -- > Carlos Borroto > Baltimore, MD > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
