Hi Edge, Are you referring to the ENCODE RNA-seq tracks on the UCSC Genome Browser for the hg19 Assembly?
If that is the case, there are description pages that should help you understand the expression levels. To view the overall description page for the RNA seq tracks click on the the blue link that says "ENC RNA-seq..." in the "Expression" section when in the hg19 assembly. Here is the direct link to the ENC RNA-seq Super-track Settings Page: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRnaSeqSuper To get more detailed information for specific tracks, click on the links for each specific track from the ENC RNA-seq Super-track Settings page. I hope that this helps clarify things for you. If this doesn't answer your question, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "Edge Edge" <[email protected]> To: [email protected] Sent: Thursday, April 28, 2011 6:36:35 AM Subject: [Genome] Gene expression viewer of UCSC Genome Browser problem Hi, Can I have the user guide or explanation detail of gene expression level in UCSC Genome Browser? I got a bit confusing regarding the gene expression level of human RNA-seq in UCSC Genome Browser :( Thanks for advice. best regards edge _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
