To whom it may concern: I would like to use UCSC genome browser to do some comparative analysis between human and chimpanzee. Right now I have the genome coordinates for the region of interest in human (hg18), and I would like to look for the orthologous site in the chimpanzee genome.
I have the coordinates in human as BED format, here is the part of the file: chr11 66346610 66346721 3 200 + chr14 90693735 90693787 4 200 + chr3 197937922 197938039 5 200 + chr1 143729237 143729356 6 200 - I wonder if I can directly use this file as an input, and utilize some tool in UCSC genome browser to directly get the coordinates of orthologous site in the chimpanzee. It would be nice if the output file has the same format as my input. Thank you so much and I am looking forward to your reply. Best, Jia Zeng _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
