Dear Sir /Madam For a certain set of SNPs I want to know which are the SNPs in LD with the query SNPs and their r^2 values. The output that I am downloading from UCSC tables, is giving me a table in which D prime values, r^2 and LOD scores are represented in alphabets. I am unable to inertprate the results. Also how can I get the list of all other SNPs in LD with my query SNPs? Waiting for the soon reply.
Regards Aanchal _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
