Hi Haojam, If you have a list of genes and just need the start and end positions, you'll want to use the table browser (click "Tables" in the top blue menu bar). Select
- the clade/genome/assembly for hg18 - group: Genes and gene prediction tracks - the geneset you want to use/track (e.g., UCSC Genes) - click the paste list button next to "identifies:" and paste in yur gene list (note the formats) an submit - output format: selected fields from ... - click get output - select the fields you need (e.g., name, txStart, txEnd) and click get output In the same Genes group, there's a track called sno/miRNA hat might have the data you need. It's available in the table browser as well. Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 6/19/11 9:22 PM, 하오잠 로 wrote: > Dear Sir/ Madam, > > In UCSC genome browser which option should I click to see and analyze for > finding genomic coordinates on hg18 march 2006. I would like to compare the > genomic start and end positions of over 30,000 genes with that of 705 > precursor miRNA genes. > ftp://hgdownload.cse.ucsc.edu/goldenPath/hg18 > I would be glad for your support and cooperation. > > With warm regards, > Haojam Rocky > Seoul National University College of Medicine > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
